EMBO / SourceData_NER_v1_0_0_BioLinkBERT_large

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Total runs: 5
24-hour runs: 0
7-day runs: 0
30-day runs: -5
Model's Last Updated: Septiembre 13 2025
token-classification

Introduction of SourceData_NER_v1_0_0_BioLinkBERT_large

Model Details of SourceData_NER_v1_0_0_BioLinkBERT_large

SourceData_NER_v1_0_0_BioLinkBERT_large

This model is a fine-tuned version of michiyasunaga/BioLinkBERT-large on the source_data dataset. It achieves the following results on the evaluation set:

  • Loss: 0.1324
  • Accuracy Score: 0.9585
  • Precision: 0.8224
  • Recall: 0.8583
  • F1: 0.8400
Model description

More information needed

Intended uses & limitations

More information needed

Training and evaluation data

More information needed

Training procedure
Training hyperparameters

The following hyperparameters were used during training:

  • learning_rate: 5e-05
  • train_batch_size: 16
  • eval_batch_size: 64
  • seed: 42
  • gradient_accumulation_steps: 4
  • total_train_batch_size: 64
  • optimizer: Use adafactor and the args are: No additional optimizer arguments
  • lr_scheduler_type: linear
  • num_epochs: 2.0
Training results
Training Loss Epoch Step Validation Loss Accuracy Score Precision Recall F1
0.1047 0.9994 863 0.1295 0.9563 0.8179 0.8437 0.8306
0.0747 1.9988 1726 0.1324 0.9585 0.8224 0.8583 0.8400
Framework versions
  • Transformers 4.46.3
  • Pytorch 1.13.1+cu117
  • Datasets 3.1.0
  • Tokenizers 0.20.3

Runs of EMBO SourceData_NER_v1_0_0_BioLinkBERT_large on huggingface.co

5
Total runs
0
24-hour runs
0
3-day runs
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7-day runs
-5
30-day runs

More Information About SourceData_NER_v1_0_0_BioLinkBERT_large huggingface.co Model

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SourceData_NER_v1_0_0_BioLinkBERT_large install

SourceData_NER_v1_0_0_BioLinkBERT_large is an open source model from GitHub that offers a free installation service, and any user can find SourceData_NER_v1_0_0_BioLinkBERT_large on GitHub to install. At the same time, huggingface.co provides the effect of SourceData_NER_v1_0_0_BioLinkBERT_large install, users can directly use SourceData_NER_v1_0_0_BioLinkBERT_large installed effect in huggingface.co for debugging and trial. It also supports api for free installation.

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