UMCU / SapBERT-from-PubMedBERT-fulltext-mean-token-ST_bf16

SentenceTransformer based on cambridgeltl/SapBERT-from-PubMedBERT-fulltext-mean-token

This is a sentence-transformers model finetuned from cambridgeltl/SapBERT-from-PubMedBERT-fulltext-mean-token . It maps sentences & paragraphs to a 768-dimensional dense vector space and can be used for semantic textual similarity, semantic search, paraphrase mining, text classification, clustering, and more.

Model Details

Model Description

• Model Type: Sentence Transformer
• Base model: cambridgeltl/SapBERT-from-PubMedBERT-fulltext-mean-token
• Maximum Sequence Length: 25 tokens
• Output Dimensionality: 768 dimensions
• Similarity Function: Cosine Similarity

Model Sources

• Documentation: Sentence Transformers Documentation
• Repository: Sentence Transformers on GitHub
• Hugging Face: Sentence Transformers on Hugging Face

Full Model Architecture

SentenceTransformer(
  (0): Transformer({'max_seq_length': 25, 'do_lower_case': False, 'architecture': 'BertModel'})
  (1): Pooling({'word_embedding_dimension': 768, 'pooling_mode_cls_token': False, 'pooling_mode_mean_tokens': True, 'pooling_mode_max_tokens': False, 'pooling_mode_mean_sqrt_len_tokens': False, 'pooling_mode_weightedmean_tokens': False, 'pooling_mode_lasttoken': False, 'include_prompt': True})
)

Usage

Direct Usage (Sentence Transformers)

First install the Sentence Transformers library:

pip install -U sentence-transformers

Then you can load this model and run inference.

from sentence_transformers import SentenceTransformer

# Download from the 🤗 Hub
model = SentenceTransformer("sentence_transformers_model_id")
# Run inference
sentences = [
    'The weather is lovely today.',
    "It's so sunny outside!",
    'He drove to the stadium.',
]
embeddings = model.encode(sentences)
print(embeddings.shape)
# [3, 768]

# Get the similarity scores for the embeddings
similarities = model.similarity(embeddings, embeddings)
print(similarities)
# tensor([[1.0000, 0.5664, 0.3789],
#         [0.5664, 1.0000, 0.3086],
#         [0.3789, 0.3086, 1.0000]], dtype=torch.bfloat16)

Training Details

Framework Versions

• Python: 3.12.3
• Sentence Transformers: 5.0.0
• Transformers: 4.48.0
• PyTorch: 2.5.0+cu121
• Accelerate: 1.8.1
• Datasets: 3.6.0
• Tokenizers: 0.21.2

Citation

BibTeX